Data quality metrics extracted from 5b4v.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5B4V at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
PHOTON FACTORY BEAMLINE BL-5A
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Photon Factory
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL-5A
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2011-06-25
Detector
_diffrn_detector.type
ADSC QUANTUM 315r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.0
Software
Data reduction
_software.classification
iMOSFLM
Data scaling
_software.classification
SCALA (3.3.16)
Phasing
_software.classification
MOLREP
Refinement
_software.classification
REFMAC (5.7.0029)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 42 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
62.77 62.77 119.31 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
22.900 22.900 1.580
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.500 4.740 1.500
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs
0.083 0.046 0.294
  Rmeas - - -
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs
38406 - -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
22.20 14.40 2.60
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.7 86.8 99.1
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
13.3 10.5 12.7
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
5B4V
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-04-19
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
21.0 - 1.500 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1396 / 0.1626