Data quality metrics extracted from 5b42.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5B42 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SPRING-8 BEAMLINE BL38B1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SPring-8
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL38B1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2015-12-02
Detector
_diffrn_detector.type
RAYONIX MX225HE
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.0000
Software
Data reduction
_software.classification
HKL-2000
Data scaling
_software.classification
HKL-2000
Phasing
_software.classification
PHENIX
Model building
_software.classification
PHENIX
Refinement
_software.classification
PHENIX (1.10.1_2155)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 43 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
35.349 35.349 161.560 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00000 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
24.702 1.400
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.350 1.350
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.056 -
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
23801 -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
59.80 -
Completeness [%]
_reflns.percent_possible_obs
100.0 -
Multiplicity
_reflns.pdbx_redundancy
13.5 -
CC(1/2)
_reflns.pdbx_CC_half
0.821 -

Refinement
PDB entry ID
_entry.id
5B42
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-03-30
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
24.7 - 1.350 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1400 / 0.1834
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD