Data quality metrics extracted from 2b25.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 2B25 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
CHESS BEAMLINE F2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
CHESS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
F2
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2005-05-09
Detector
_diffrn_detector.type
ADSC QUANTUM 210
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97914
Software
Data reduction
_software.classification
DENZO (Zbyszek Otwinowski; zbyszek@mix.swmed.edu)
Data scaling
_software.classification
SCALEPACK (Zbyszek Otwinowski; zbyszek@mix.swmed.edu)
Phasing #1
_software.classification
MOLREP (A. Vagin; alexei@ysbl.york.ac.uk)
Phasing #2
_software.classification
RESOLVE (Terwilliger, T. C; terwilliger@LANL.gov)
Refinement
_software.classification
REFMAC (refmac_5.2.0005; 24/04/2001; Murshudov, G.N.; ccp4@dl.ac.uk)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 2 2 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
75.533 157.106 113.492 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97914 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
78.570 40.000 2.380
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.300 4.950 2.300
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.082 - 0.415
  Rmeas - - -
  Rpim - - -
Total number of observations
_reflns_shell.number_measured_obs
- 3202 2998
Total number unique
_reflns.number_obs
30305 - -
  <I/σ(I)> - - -
Completeness [%]
_reflns.percent_possible_obs
99.6 - -
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
5.7 5.2 5.9
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
2B25
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2005-09-16
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
78.6 - 2.500 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2466 / 0.2822
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
PDB Entry 1I9G