Data quality metrics extracted from 9az9.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 9AZ9 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
RIGAKU FR-E SUPERBRIGHT
Temperature [K]
_diffrn.ambient_temp
293
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2012-08-10
Detector
_diffrn_detector.type
RIGAKU SATURN A200
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.54
Software
Data reduction
_software.classification
XDS (March 15, 2012)
Data scaling
_software.classification
XSCALE (March 15, 2012)
Refinement
_software.classification
PHENIX (1.21_5207)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 63
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
66.89 66.89 40.93 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54000 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
21.890 2.050
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.000 2.000
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.022 0.038
Rmeas
_reflns.pdbx_Rrim_I_all
0.024 -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
13465 819
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
50.00 -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
97.2 79.1
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
5.5 5.5
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
1.000 0.997

Refinement
PDB entry ID
_entry.id
9AZ9
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2024-03-10
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
21.9 - 2.000 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1358 / 0.1759
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given