Data quality metrics extracted from 8ay2.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 8AY2 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ESRF BEAMLINE ID14-4
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ESRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
ID14-4
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2012-06-25
Detector
_diffrn_detector.type
ADSC QUANTUM 315r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97944
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XDS
Phasing
_software.classification
PHASER
Refinement #1
_software.classification
PHENIX (1.20.1_4487)
Refinement #2
_software.classification
PHENIX (1.20.1_4487)
General information
Spacegroup name
_symmetry.space_group_name_H-M
I 4 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
190.004 190.004 175.275 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97944 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
19.990
High resolution limit [Å]
_reflns.d_resolution_high
2.500
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.134
Rmeas
_reflns.pdbx_Rrim_I_all
0.138
Rpim
_reflns.pdbx_Rpim_I_all
0.035
  Total number of observations -
Total number unique
_reflns.number_obs
94874
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
20.47
Completeness [%]
_reflns.percent_possible_obs
89.2
Multiplicity
_reflns.pdbx_redundancy
14.9
CC(1/2)
_reflns.pdbx_CC_half
0.999

Refinement
PDB entry ID
_entry.id
8AY2
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2022-09-01
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
20.0 - 2.500 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1894 / 0.2149
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD