Data quality metrics extracted from 5ax2.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5AX2 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SLS BEAMLINE X06DA
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SLS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
X06DA
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2014-10-18
Detector
_diffrn_detector.type
DECTRIS PILATUS 2M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.078
Software
Data reduction
_software.classification
HKL-2000
Data scaling
_software.classification
HKL-2000
Phasing
_software.classification
PHENIX
Refinement
_software.classification
REFMAC (5.6.0117)
General information
Spacegroup name
_symmetry.space_group_name_H-M
I 2 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
40.875 53.656 84.196 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.07800 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
45.000 2.450
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.400 2.400
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs
0.063 0.172
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
3858 -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
21.40 2.60
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
95.9 68.6
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
4.9 2.2
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
5AX2
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-07-13
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
45.0 - 2.400 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2312 / 0.2617
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD