Data quality metrics extracted from 6am5.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6AM5 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 22-ID
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
22-ID
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2016-02-23
Detector
_diffrn_detector.type
MARMOSAIC 300 mm CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1
Software
Data collection
_software.classification
HKL-2000
Data reduction
_software.classification
HKL-2000
Data scaling
_software.classification
HKL-2000
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (1.10.1_2155: ???)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
228.106 49.900 92.455 90.00 95.72 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 50.000 2.440
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.400 6.510 2.400
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.061 0.036 0.533
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.072 0.043 0.624
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.037 0.022 0.322
Total number of observations
_reflns.pdbx_number_measured_all
152065 - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
40458 2090 1993
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
8.70 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.0 95.9 98.5
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.8 3.6 3.7
CC(1/2)
_reflns_shell.pdbx_CC_half
- 0.997 0.852

Refinement
PDB entry ID
_entry.id
6AM5
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2017-08-09
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
38.8 - 2.394 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2011 / 0.2437