Data quality metrics extracted from 6aem.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6AEM at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRF BEAMLINE BL19U1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL19U1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2017-03-11
Detector
_diffrn_detector.type
DECTRIS PILATUS3 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.978530
Software
Data reduction
_software.classification
XDS (Nov 11, 2017, built on 20171111)
Data scaling
_software.classification
Aimless (version 0.5.29), CCP4 7.0.026
Phasing
_software.classification
PHASER (2.7.17)
Refinement
_software.classification
PHENIX (1.10.1_2155)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
71.096 46.069 41.616 90.00 97.39 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97853 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
38.566 1.277
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.272 1.272
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.065 0.924
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.070 1.001
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.027 0.381
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
33927 308
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
19.30 2.10
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
96.7 85.3
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.7 6.8
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.999 0.771

Refinement
PDB entry ID
_entry.id
6AEM
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2018-08-05
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
35.3 - 1.272 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1508 / 0.1862
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
4L9D