Data quality metrics extracted from 8abt.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 8ABT at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I23
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I23
Temperature [K]
_diffrn.ambient_temp
45
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2020-09-23
Detector
_diffrn_detector.type
DECTRIS PILATUS 12M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
2.7552
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XSCALE
Phasing
_software.classification
CRANK2
Refinement
_software.classification
REFMAC (5.8.0267)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 63
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
78.045 78.045 159.541 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.976252.75520 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
51.570 1.840 1.410
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.390 1.800 1.390
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.135 0.788 2.756
  Rmeas - - -
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.031 0.197 0.826
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
110449 2997 5506
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
13.30 4.50 0.40
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
100.0 99.5 99.7
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
19.3 15.2 11.8
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.999 0.951 0.350

Refinement
PDB entry ID
_entry.id
8ABT
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2022-07-04
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
51.6 - 1.390 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2372 / 0.2588
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD