Data quality metrics extracted from 8a9m.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 8A9M at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SRS BEAMLINE PX9.6
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SRS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
PX9.6
Temperature [K]
_diffrn.ambient_temp
293
Detector technology
_diffrn_detector.detector
IMAGE PLATE
Collection date
_diffrn_detector.pdbx_collection_date
1993-04-30
Detector
_diffrn_detector.type
MAR scanner 300 mm plate
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.8975
Software
Data reduction
_software.classification
MOSFLM (Andrew G.W. Leslie; andrew@mrc-lmb.cam.ac.uk)
Data scaling
_software.classification
Aimless (0.7.7; 23/04/21; Phil Evans)
Phasing
_software.classification
PHASER (2.8.3; Sat Aug 21 20:52:02 2021 (git 7539, 219b54030... ); Randy J. Read; cimr-phaser@lists.cam.ac.uk)
Refinement
_software.classification
REFMAC (5.8.0267)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
73.370 100.318 62.177 90.00 137.27 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.89750 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
23.820 23.810 2.270
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.200 9.070 2.200
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.133 0.098 0.389
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.148 0.116 0.436
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.063 0.059 0.191
Total number of observations
_reflns_shell.number_measured_all
- 848 6329
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
15296 204 1335
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.pdbx_netI_over_sigmaI_obs
8.20 13.80 3.80
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.5 89.1 99.5
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
4.9 4.2 4.7
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.986 0.926 0.896

Refinement
PDB entry ID
_entry.id
8A9M
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2022-06-28
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
23.8 - 2.200 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1665 / 0.2191
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
1MSA