Experiment | |
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Method _exptl.method | X-RAY DIFFRACTION The method used in the experiment. |
Experimental protocol _diffrn_radiation.pdbx_diffrn_protocol | SINGLE WAVELENGTH SINGLE WAVELENGTH, LAUE, or MAD. |
Source type _diffrn_source.source | SYNCHROTRON The general class of the radiation source. |
Source details _diffrn_source.type | PHOTON FACTORY BEAMLINE BL-5A The make, model or name of the source of radiation. |
Synchrotron site _diffrn_source.pdbx_synchrotron_site | Photon Factory Synchrotron site. |
Beamline _diffrn_source.pdbx_synchrotron_beamline | BL-5A Synchrotron beamline. |
Temperature [K] _diffrn.ambient_temp | 95 The mean temperature in kelvins at which the intensities were |
Detector technology _diffrn_detector.detector | CCD The general class of the radiation detector. |
Collection date _diffrn_detector.pdbx_collection_date | 2007-03-10 The date of data collection. |
Detector _diffrn_detector.type | ADSC QUANTUM 315 The make, model or name of the detector device used. |
Wavelength(s) [Å] _diffrn_source.pdbx_wavelength_list | 1.000 Comma separated list of wavelengths or wavelength range. |
Software | |
Data collection _software.classification | ADSC (Quantum) The classification of the program according to its |
Data reduction _software.classification | MOSFLM (A.G.W. Leslie; andrew@mrc-lmb.cam.ac.uk) The classification of the program according to its |
Data scaling _software.classification | SCALA (Phil Evans; pre@mrc-lmb.cam.ac.uk) The classification of the program according to its |
Phasing _software.classification | PHASER (R. J. Read; cimr-phaser@lists.cam.ac.uk) The classification of the program according to its |
Refinement _software.classification | REFMAC (5.5.0102; Murshudov, G.N.; ccp4@dl.ac.uk) The classification of the program according to its |
General information | |
Spacegroup name _symmetry.space_group_name_H-M | C 1 2 1 Hermann-Mauguin space-group symbol. Note that the |
Unit cell parameters _cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma} | 157.227 Unit-cell length a corresponding to the structure reported in 42.733 Unit-cell length b corresponding to the structure reported in 46.039 Unit-cell length c corresponding to the structure reported in 90.00 Unit-cell angle alpha of the reported structure in degrees. 102.91 Unit-cell angle beta of the reported structure in degrees. 90.00 Unit-cell angle gamma of the reported structure in degrees. |
Wavelength _diffrn_radiation_wavelength.wavelength | 1.00000 ÅThe radiation wavelength in angstroms. |
Data quality metrics | Overall | InnerShell | OuterShell |
---|---|---|---|
Low resolution limit [Å] _reflns.d_resolution_low _reflns_shell.d_res_low | 76.696 The largest value in angstroms for the interplanar spacings | 76.700 The highest value in angstroms for the interplanar spacings | 2.610 The highest value in angstroms for the interplanar spacings |
High resolution limit [Å] _reflns.d_resolution_high _reflns_shell.d_res_high | 2.480 The smallest value in angstroms for the interplanar spacings | 11.360 The smallest value in angstroms for the interplanar spacings | 2.540 The smallest value in angstroms for the interplanar spacings |
Rmerge _reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs | 0.146 The R value for merging intensities satisfying the observed | 0.062 The value of Rmerge(I) for reflections classified as 'observed' | 0.650 The value of Rmerge(I) for reflections classified as 'observed' |
Rmeas | - | - | - |
Rpim | - | - | - |
Total number of observations _reflns_shell.number_measured_all | - | 401 The total number of reflections measured for this | 2597 The total number of reflections measured for this |
Total number unique _reflns.number_obs _reflns_shell.number_unique_all | 10051 The number of reflections in the REFLN list (not the DIFFRN_REFLN | 128 The total number of measured reflections which are symmetry- | 735 The total number of measured reflections which are symmetry- |
<I/σ(I)> _reflns_shell.meanI_over_sigI_obs | - | 9.40 The ratio of the mean of the intensities of the reflections | 1.20 The ratio of the mean of the intensities of the reflections |
Completeness [%] _reflns.percent_possible_obs _reflns_shell.percent_possible_all | 99.9 The percentage of geometrically possible reflections represented | 99.8 The percentage of geometrically possible reflections represented | 100.0 The percentage of geometrically possible reflections represented |
Multiplicity _reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy | 3.5 Overall redundancy for this data set. | 3.1 Redundancy for the current shell. | 3.5 Redundancy for the current shell. |
CC(1/2) | - | - | - |
Refinement | |
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PDB entry ID _entry.id | 3A4P |
Deposition date _pdbx_database_status.recvd_initial_deposition_date | 2009-07-13 |
Resolution _refine.ls_d_res_low _refine.ls_d_res_high | 44.9 - 2.540 Å |
Rwork/Rfree _refine.ls_R_factor_R_work _refine.ls_R_factor_R_free | 0.1830 / 0.2400 |
Structure solution method _refine.pdbx_method_to_determine_struct | MOLECULAR REPLACEMENT |
Starting model (for MR) _refine.pdbx_starting_model | PDB ID 1R1W |