Data quality metrics extracted from 424d.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 424D at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
RIGAKU RU300
Temperature [K]
_diffrn.ambient_temp
100.0
Detector technology
_diffrn_detector.detector
DIFFRACTOMETER
Collection date
_diffrn_detector.pdbx_collection_date
1992-03-02
Detector
_diffrn_detector.type
RIGAKU AFC-5R
Software
Data scaling
_software.classification
TEXSAN
Phasing
_software.classification
ULTIMA
Model building
_software.classification
ULTIMA
Refinement
_software.classification
X-PLOR (3.1)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
40.539 40.107 40.469 82.62 116.20 80.68
Wavelength
_diffrn_radiation_wavelength.wavelength
NA

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
19.000
High resolution limit [Å]
_reflns.d_resolution_high
2.700
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.065
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
5415
  <I/σ(I)> -
Completeness [%]
_reflns.percent_possible_obs
89.4
Multiplicity
_reflns.pdbx_redundancy
1.1
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
424D
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
1998-09-14
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
19.0 - 2.700 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2110 / 0.2830
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
IDEAL B-DNA